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ngs-ci 0.0.2.b

Calculated a metric that estimates read complexity at each base for RNA-seq BAM files. Alternative to pileup format.

Gemfile:
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install:
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Versions:

  1. 0.0.2.b - December 21, 2015 (86.5 KB)
  2. 0.0.1.a - October 28, 2015 (81 KB)
Show all versions (3 total)

Runtime Dependencies (5):

bio-samtools = 2.3.2
parallel ~> 1.4
ruby-prof ~> 0.15
trollop ~> 2.1.2
yell ~> 2

Development Dependencies (5):

bundler ~> 1
coveralls ~> 0
pry ~> 0
rake ~> 10.0
rspec ~> 3.1

Owners:

Authors:

  • Matthew Ralston

SHA 256 checksum:

9d5bb4c36d07be53e2fc64fa4a3965028893a1a1b1889faa89374341aae382bb

Total downloads 3,857

For this version 1,892

License:

GPL v3

Required Ruby Version: >= 0

Required Rubygems Version: > 1.3.1

Links: